PLIANT / POMPE
Research collaboration

Project tracker

Pompe research workflow

A shared record of completed work, decisions, and next steps.

Collaboration withColin MagowanPliant Therapeutics
Current stage
Tracker setup & progress reporting
Latest GitHub push

Progress log

10 commits

Up to 10 recent commits on main. Summaries are commit messages; dates are commit times. Multiple commits can belong to one push.

  1. GitHub commit

    Add Colin's Pompe email as the client request

    Preserve the supplied email in the kickoff source folder and list it in the client-request section of the tracker.

    37 lines added · 6 lines removed

    Changed files and commit details
    • AddedKickoff/Client_Request/Colin_Magowan_Pompe_Client_Request.md
    • ModifiedKickoff/README.md
    • ModifiedTracker/README.md
    • ModifiedTracker/index.html

    View commit d10f0ba on GitHub ↗

  2. GitHub commit

    Connect kickoff source materials to the project roadmap

    Add project-level Kickoff folders for client requests, meeting notes, and supporting materials. Show a categorized file count and expandable source list in the first roadmap card. Refresh local file links after pushes and regenerate the hosted list during Vercel builds. Publish only the HTML; hosted document links point to the private GitHub source files.

    252 lines added · 5 lines removed

    Changed files and commit details
    • Modified.gitignore
    • AddedKickoff/Client_Request/.gitkeep
    • AddedKickoff/Meeting_Notes/.gitkeep
    • AddedKickoff/README.md
    • AddedKickoff/Supporting_Materials/.gitkeep
    • ModifiedREADME.md
    • ModifiedTracker/README.md
    • ModifiedTracker/after_push.py
    • AddedTracker/build_tracker.py
    • ModifiedTracker/index.html
    • AddedTracker/refresh_materials.py
    • AddedTracker/vercel.json

    View commit 6c9e73f on GitHub ↗

  3. GitHub commit

    Simplify roadmap to kickoff and intake prototype

    Remove the three later roadmap stages, target-date note, and footer text.

    12 lines added · 18 lines removed

    Changed files and commit details
    • ModifiedTracker/index.html

    View commit 9daec91 on GitHub ↗

  4. GitHub commit

    Add client kickoff and a labeled transition to the roadmap

    Start the roadmap with Project kickoff & client requirements. Connect it to the intake prototype with an arrow labeled Codex GPT-6 Astra Ultra, and retain the later planned research steps.

    36 lines added · 11 lines removed

    Changed files and commit details
    • ModifiedTracker/index.html

    View commit aed56c7 on GitHub ↗

  5. GitHub commit

    Update progress log with the current-stage summary changes

    11 lines added · 2 lines removed

    Changed files and commit details
    • ModifiedTracker/index.html

    View commit 88bc1c6 on GitHub ↗

  6. GitHub commit

    Simplify tracker summary and align the current stage with active work

    Remove Next milestone from the summary and show Tracker setup & progress reporting as the current stage. Document that stage updates follow active project work and are preserved during GitHub log refreshes.

    14 lines added · 6 lines removed

    Changed files and commit details
    • ModifiedTracker/README.md
    • ModifiedTracker/index.html

    View commit 05995b7 on GitHub ↗

  7. GitHub commit

    Refresh tracker for deployment from haozeyu24

    Update the saved progress log to include the collapsible-log change. Publish this commit using the GitHub account that owns the Vercel project.

    11 lines added · 2 lines removed

    Changed files and commit details
    • ModifiedTracker/index.html

    View commit c3f2c27 on GitHub ↗

  8. GitHub commit

    Make the progress log collapsible

    Start the Progress log collapsed with a visible commit count and show/hide control. Preserve independent file-detail toggles and the collapsible layout when GitHub activity is refreshed.

    42 lines added · 8 lines removed

    Changed files and commit details
    • ModifiedTracker/README.md
    • ModifiedTracker/index.html
    • ModifiedTracker/refresh_github.py

    View commit f641583 on GitHub ↗

  9. GitHub commit

    Add project tracker with automatic GitHub activity refresh

    Add a local HTML tracker with the project roadmap and a progress log sourced from GitHub commits. Include push timestamps, commit summaries, and links to changed files. Provide a repository-local hook installer to refresh the tracker after accepted origin branch updates, with a manual refresh command and setup documentation.

    527 lines added · 1 lines removed

    Changed files and commit details
    • Modified.gitignore
    • ModifiedREADME.md
    • AddedTracker/README.md
    • AddedTracker/after_push.py
    • AddedTracker/index.html
    • AddedTracker/install_auto_refresh.py
    • AddedTracker/refresh_github.py

    View commit b39995b on GitHub ↗

  10. GitHub commit

    Initialize Pompe research planning workspace

    123 lines added · 0 lines removed

    Changed files and commit details
    • Added.gitignore
    • AddedPROJECT_BRIEF.md
    • AddedREADME.md

    View commit eb888ec on GitHub ↗

Roadmap

From client requirements to a reusable research workflow.

Codex GPT-6 Astra Ultra
02Next

Build the intake prototype

Capture starting materials and generate a structured draft research brief.